Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2528

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2527: 10895 - BLAST protein DGCR14-like [Mucor ambiguus], at 363824 to 364696 10895 mRNA_2528: 10896 - HMMPfam-Fungal chitosanase of glycosyl hydrolase group 75-PF07335, at 365082 to 366780 10896 mRNA_2529: 10897 - K01613 psd, PISD phosphatidylserine decarboxylase, at 366940 to 368677 10897

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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364,197 - 10895 mRNA_2527 0.43 -2.0
364,236 - 10895 mRNA_2527 0.47 -0.1
364,249 + 10895 mRNA_2527 0.49 -0.6
364,801 + -1.5
365,106 + -1.1
365,272 + 10896 mRNA_2528 0.11 -0.6
365,991 - 10896 mRNA_2528 0.54 0.2
366,085 + 10896 mRNA_2528 0.59 -2.7
366,710 + 0.1
367,018 - -2.0
367,274 - 10897 mRNA_2529 0.19 -0.9
367,460 - 10897 mRNA_2529 0.30 0.4
367,469 + 10897 mRNA_2529 0.30 -1.5
367,690 - 10897 mRNA_2529 0.43 -1.5
367,720 - 10897 mRNA_2529 0.45 -2.4
367,759 - 10897 mRNA_2529 0.47 -3.1