Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2485

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2484: 10852 - K11498 CENPE centromeric protein E, at 257699 to 260992 10852 mRNA_2485: 10853 - K07760 CDK cyclin-dependent kinase, at 261080 to 262482 10853 mRNA_2486: 10854 - KOG3134 Predicted membrane protein, at 262874 to 263661 10854

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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260,231 + 10852 mRNA_2484 0.77 -2.2
260,285 - 10852 mRNA_2484 0.79 -1.1
260,327 + 10852 mRNA_2484 0.80 -2.7
260,557 - 10852 mRNA_2484 0.87 -1.1
260,571 - 10852 mRNA_2484 0.87 -0.5
260,582 + 10852 mRNA_2484 0.88 0.6
260,793 + -2.2
260,850 + 0.3
261,008 + -1.1
261,016 - -0.3
261,100 + -1.2
261,487 + 10853 mRNA_2485 0.29 -0.1
261,612 + 10853 mRNA_2485 0.38 -0.1
261,805 + 10853 mRNA_2485 0.52 -0.4
262,677 + -2.0
262,724 + -0.2
262,759 + -1.4
262,811 - -0.3
262,959 - 10854 mRNA_2486 0.11 -2.0
262,960 + 10854 mRNA_2486 0.11 0.1
262,967 - 10854 mRNA_2486 0.12 -3.1
263,096 - 10854 mRNA_2486 0.28 -0.8
263,407 - 10854 mRNA_2486 0.68 -1.0
263,438 - 10854 mRNA_2486 0.72 -2.2