Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2460

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2459: 10827 - KOG2747 Histone acetyltransferase (MYST family), at 186043 to 188568 10827 mRNA_2460: 10828 - SUPERFAMILY--SSF57997, at 188946 to 195534 10828 mRNA_2461: 10829 - Hypothetical Protein, at 195673 to 198074 10829

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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188,411 - -1.1
188,726 + 1.3
188,739 - -0.1
188,751 + -3.0
188,779 + -2.1
188,926 + -2.6
189,378 + 0.7
189,540 + -1.2
189,543 - -1.2
190,044 + 10828 mRNA_2460 0.17 -1.8
190,075 + 10828 mRNA_2460 0.17 0.7
190,098 - 10828 mRNA_2460 0.17 -0.2
190,098 - 10828 mRNA_2460 0.17 -1.0
190,247 + 10828 mRNA_2460 0.20 -2.2
190,650 + 10828 mRNA_2460 0.26 -0.8
191,056 + 10828 mRNA_2460 0.32 -0.9
191,480 - 10828 mRNA_2460 0.38 -1.0
191,507 + 10828 mRNA_2460 0.39 1.3
191,526 - 10828 mRNA_2460 0.39 -0.1
191,834 + 10828 mRNA_2460 0.44 -3.2
192,625 - 10828 mRNA_2460 0.56 -3.6
192,898 - 10828 mRNA_2460 0.60 0.3
192,965 + 10828 mRNA_2460 0.61 -1.6
193,082 - 10828 mRNA_2460 0.63 -0.9
193,261 + 10828 mRNA_2460 0.65 -1.0
193,995 - 10828 mRNA_2460 0.77 -0.8
194,271 - 10828 mRNA_2460 0.81 -2.2
194,278 - 10828 mRNA_2460 0.81 -0.3
194,525 - 10828 mRNA_2460 0.85 -0.7
194,711 + 10828 mRNA_2460 0.87 -1.0
196,114 + 10829 mRNA_2461 0.18 -1.2