Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2451

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2450: 10818 - KOG3037 Cell membrane glycoprotein, at 161540 to 163035 10818 mRNA_2451: 10819 - Hypothetical Protein, at 163388 to 164949 10819 mRNA_2452: 10820 - HMMPfam-Ribonuclease H2 non-catalytic subunit (Ylr154p-like)-PF08615, at 165209 to 166286 10820

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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162,602 + 10818 mRNA_2450 0.71 -3.3
162,604 - 10818 mRNA_2450 0.71 -0.5
162,724 - 10818 mRNA_2450 0.79 2.1
162,862 - 10818 mRNA_2450 0.88 -0.2
162,891 + -2.1
162,902 - -1.7
162,919 + -1.0
163,053 + -2.3
163,063 - -0.2
163,063 - -1.7
163,067 - -0.5
163,077 - -3.1
163,484 + -0.5
163,518 + -2.6
163,686 + 10819 mRNA_2451 0.19 -3.4
163,985 + 10819 mRNA_2451 0.38 0.0
164,234 + 10819 mRNA_2451 0.54 -0.8
164,690 - 10819 mRNA_2451 0.83 0.3
164,801 + -1.9
164,829 + -1.2
164,934 - -1.1
164,976 - -0.5
165,075 + -3.0
165,130 + 0.1
165,241 - -0.8
165,261 + 0.5
165,427 + 10820 mRNA_2452 0.20 -1.2
165,427 + 10820 mRNA_2452 0.20 0.2
165,847 - 10820 mRNA_2452 0.59 -2.2
165,917 - 10820 mRNA_2452 0.66 -3.5