Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2447

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2446: 10814 - K11396 YNG2, EAF4 chromatin modification-related protein YNG2, at 153501 to 155365 10814 mRNA_2447: 10815 - Hypothetical Protein, at 155632 to 156162 10815 mRNA_2448: 10816 - Hypothetical Protein, at 157035 to 159573 10816

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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155,416 - -2.1
155,432 + -1.1
155,434 + 0.3
155,453 + -2.4
155,460 + -0.1
155,463 + 0.4
155,568 + -1.8
155,672 + -1.3
155,714 - 10815 mRNA_2447 0.15 -1.9
155,740 + 10815 mRNA_2447 0.20 -3.3
155,743 - 10815 mRNA_2447 0.21 0.6
155,750 + 10815 mRNA_2447 0.22 -1.3
155,772 - 10815 mRNA_2447 0.26 0.4
155,781 + 10815 mRNA_2447 0.28 -1.4
155,859 - 10815 mRNA_2447 0.43 -0.6
155,880 + 10815 mRNA_2447 0.47 -0.6
155,884 - 10815 mRNA_2447 0.47 -1.7
155,886 + 10815 mRNA_2447 0.48 -0.2
155,887 - 10815 mRNA_2447 0.48 -1.0
155,892 + 10815 mRNA_2447 0.49 0.9
155,904 + 10815 mRNA_2447 0.51 -2.7
155,904 + 10815 mRNA_2447 0.51 -0.3
155,922 - 10815 mRNA_2447 0.55 -1.3
155,944 + 10815 mRNA_2447 0.59 -0.8
155,947 - 10815 mRNA_2447 0.59 -1.8
155,952 + 10815 mRNA_2447 0.60 -1.4
155,964 + 10815 mRNA_2447 0.63 -2.2
155,983 + 10815 mRNA_2447 0.66 0.3
155,988 - 10815 mRNA_2447 0.67 0.5
155,991 - 10815 mRNA_2447 0.68 0.6
155,998 + 10815 mRNA_2447 0.69 -2.0
156,004 + 10815 mRNA_2447 0.70 -2.3
156,010 - 10815 mRNA_2447 0.71 -3.5
156,011 - 10815 mRNA_2447 0.71 -1.9
156,012 + 10815 mRNA_2447 0.72 -0.5
156,019 + 10815 mRNA_2447 0.73 -2.1
156,030 + 10815 mRNA_2447 0.75 -1.9
156,037 - 10815 mRNA_2447 0.76 -2.1
156,041 - 10815 mRNA_2447 0.77 -0.6
156,044 + 10815 mRNA_2447 0.78 -1.2
156,047 + 10815 mRNA_2447 0.78 0.4
156,049 + 10815 mRNA_2447 0.79 1.9
156,065 + 10815 mRNA_2447 0.82 -2.5
156,069 + 10815 mRNA_2447 0.82 -1.4
156,079 - 10815 mRNA_2447 0.84 -1.9
156,079 - 10815 mRNA_2447 0.84 -0.9
156,079 - 10815 mRNA_2447 0.84 -2.5
156,086 - 10815 mRNA_2447 0.85 -1.6
156,106 + 10815 mRNA_2447 0.89 -0.7
156,110 + -3.0
156,129 - -0.1
156,141 + -1.2
156,150 + -2.5
156,170 - -2.6
156,171 - -0.0
156,182 + -1.3
156,290 - -1.1
156,291 - -0.1
156,297 + -3.1
156,331 + -0.5
156,335 + 0.4
156,337 + -1.2
156,338 + 1.5
156,350 - -3.0
156,353 + 0.3
156,397 - 1.1
156,401 + -1.2
156,402 + -1.5
156,407 + -1.0
156,415 + -0.7
156,417 + -0.2
156,431 + -0.4
156,435 + -0.8
156,450 + -2.6
156,467 + -0.9
156,493 - -1.2
156,503 - -0.7
156,507 + 0.7
156,523 - -1.3
156,525 + -1.2
156,529 - -1.6
156,534 - 0.3
156,535 + -1.8
156,543 + -0.7
156,545 - 0.2
156,549 + -1.9
156,560 - -3.2
156,568 + -1.2
156,571 - 0.8
156,593 - -0.6
156,597 - 0.5
156,599 - -1.3
156,600 - -0.4
156,609 - -2.5
156,612 + -0.2
156,614 + 1.2
156,620 + -3.9
156,622 + 0.5
156,623 + -1.3
156,631 + -0.8
156,705 - -0.3
156,715 - -1.5
156,720 - -0.9
156,723 - -1.8
156,732 + -3.3
156,733 + -2.4
156,742 - -2.2
156,746 - -1.8
156,756 - -2.1
156,801 + -1.8
156,883 + -3.1
156,919 + -0.5
156,938 + 0.0
157,027 + -2.5
157,047 + -2.7
157,053 - -1.9