Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2438

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2438: 10806 - HMMPfam-Predicted coiled-coil protein (DUF2205)-PF10224, at 131945 to 132522 10806 mRNA_2439: 10807 - BLAST ribosome biogenesis protein [Moniliophthora rorer..., at 132736 to 133822 10807

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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130,946 + -0.5
130,948 - -1.2
130,986 - -2.4
131,063 - -1.1
131,067 + -2.2
131,067 - -0.2
131,069 - -2.1
131,153 + 0.0
131,158 - -0.3
131,169 - -2.6
131,183 - 0.4
131,196 - -0.4
131,205 - -1.6
131,206 - -1.3
131,207 + -2.3
131,230 + -1.8
131,233 + 1.9
131,239 + -2.8
131,252 + -1.0
131,263 - -3.0
131,264 + -1.8
131,271 - -0.7
131,286 - -0.7
131,374 - -0.7
131,390 - -2.8
131,405 + -0.4
131,825 + -1.8
132,276 + 10806 mRNA_2438 0.57 -2.4
132,540 - -2.7
132,544 - -3.4
132,547 - -1.5
132,548 + -2.4
132,566 + -1.7
132,573 - -0.7
132,573 + 1.4
132,575 + 0.1
132,713 - -0.6
132,728 + -0.3
132,730 + -1.2
132,731 + 0.4