Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2432

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2431: 10799 - Hypothetical Protein, at 109919 to 110380 10799 mRNA_2432: 10800 - K20028 ZDHHC2_15_20 palmitoyltransferase ZDHHC2/15/20, at 111348 to 112998 10800 mRNA_2433: 10801 - K10866 RAD50 DNA repair protein RAD50, at 113156 to 118783 10801

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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110,586 + -2.7
110,764 + -0.7
110,933 + -2.7
110,965 - -1.8
110,985 - -0.7
110,994 - 1.6
111,014 + -0.0
111,139 + -1.6
111,148 + -1.4
111,163 - -3.1
111,169 - -2.2
111,169 + -1.2
111,183 + -4.3
111,319 - -2.0
111,324 + -2.2
111,628 - 10800 mRNA_2432 0.17 0.8
111,727 - 10800 mRNA_2432 0.23 -2.8
111,921 + 10800 mRNA_2432 0.35 -0.3
112,029 + 10800 mRNA_2432 0.41 -1.3
112,458 - 10800 mRNA_2432 0.67 -1.9
112,605 + 10800 mRNA_2432 0.76 0.3
113,013 - 0.2
113,893 - 10801 mRNA_2433 0.13 -0.6