Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2417

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2416: 10784 - SUPERFAMILY--SSF51445, at 72061 to 74634 10784 mRNA_2417: 10785 - SUPERFAMILY--SSF52047, at 74792 to 76110 10785 mRNA_2418: 10786 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445, at 77070 to 79296 10786

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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74,016 + 10784 mRNA_2416 0.76 -0.7
74,257 + 10784 mRNA_2416 0.85 -0.4
74,478 + 1.0
74,481 + -0.9
74,542 - -0.1
74,605 + -2.9
74,777 - -0.2
75,237 + 10785 mRNA_2417 0.34 -0.8
75,400 + 10785 mRNA_2417 0.46 -0.1
75,428 + 10785 mRNA_2417 0.48 -1.9
75,987 - -0.2
76,075 - -2.7
76,116 - -0.3
76,120 - -0.8
76,168 - -0.1
76,252 - -3.1
76,258 - -0.5
76,267 + -2.1
76,425 - -1.5
76,446 + 1.3
76,447 - -2.1
76,460 + -1.0
76,557 - -3.2
76,594 - -1.0
76,974 + -1.3