Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2398

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2397: 10765 - Hypothetical Protein, at 21326 to 23910 10765 mRNA_2398: 10766 - SUPERFAMILY--SSF52047, at 24008 to 25280 10766 mRNA_2399: 10767 - Hypothetical Protein, at 25510 to 29581 10767

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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23,076 - 10765 mRNA_2397 0.68 0.1
23,087 - 10765 mRNA_2397 0.68 -0.4
23,205 - 10765 mRNA_2397 0.73 -1.2
23,224 - 10765 mRNA_2397 0.73 -1.0
23,495 - 10765 mRNA_2397 0.84 -0.8
23,667 - -1.9
23,682 + -1.4
23,780 - -0.5
23,789 + 0.2
23,790 + -0.5
23,814 + -1.5
23,941 - -3.1
23,953 + 1.2
23,955 + 1.0
24,014 + -1.1
24,021 + -1.5
24,121 + -1.3
24,133 - -2.2
24,145 + 10766 mRNA_2398 0.11 -2.4
24,169 - 10766 mRNA_2398 0.13 1.6
24,440 - 10766 mRNA_2398 0.34 1.7
24,579 - 10766 mRNA_2398 0.45 -1.3
24,581 - 10766 mRNA_2398 0.45 -2.2
24,720 - 10766 mRNA_2398 0.56 -0.7
24,750 + 10766 mRNA_2398 0.58 -1.9
24,773 + 10766 mRNA_2398 0.60 -2.3
24,856 - 10766 mRNA_2398 0.67 -2.7
24,895 + 10766 mRNA_2398 0.70 0.4
24,895 + 10766 mRNA_2398 0.70 -2.1
25,005 - 10766 mRNA_2398 0.78 -2.5
25,028 + 10766 mRNA_2398 0.80 -2.5
25,164 + 0.5
25,306 + -1.1
25,422 + -1.4
25,454 - -2.3
25,493 - -2.7
25,693 + -1.7
25,696 - -0.7
25,750 - -1.9
25,857 + -0.9
26,023 + 10767 mRNA_2399 0.13 -1.9