Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2386

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2385: 10753 - K01885 EARS, gltX glutamyl-tRNA synthetase, at 765791 to 769298 10753 mRNA_2386: 10754 - K01530 E3.6.3.1 phospholipid-translocating ATPase, at 769770 to 774280 10754 mRNA_2387: 10755 - K17781 TIM13 mitochondrial import inner membrane translocase subunit TIM13, at 774477 to 775750 10755

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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769,065 - -1.1
769,553 - -1.6
769,575 - -1.2
769,576 + 0.2
769,618 + -1.4
769,619 + -1.2
769,751 + -0.7
769,751 + -1.1
769,755 + -0.4
770,055 + -2.8
770,191 - -4.3
770,788 - 10754 mRNA_2386 0.23 -1.2
771,048 + 10754 mRNA_2386 0.28 -0.4
771,095 - 10754 mRNA_2386 0.29 -1.4
771,936 + 10754 mRNA_2386 0.48 -1.7
772,531 - 10754 mRNA_2386 0.61 -0.5
772,534 - 10754 mRNA_2386 0.61 -1.4
773,378 + 10754 mRNA_2386 0.80 -2.7
773,553 + 10754 mRNA_2386 0.84 -0.3
773,580 + 10754 mRNA_2386 0.84 -2.6
774,285 - -0.5
774,323 + -1.6
774,501 + -3.3
774,883 - 10755 mRNA_2387 0.32 0.0
774,884 + 10755 mRNA_2387 0.32 -1.6
775,177 - 10755 mRNA_2387 0.55 -0.1
775,260 + 10755 mRNA_2387 0.61 -1.5