Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2381

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2380: 10748 - K07889 RAB5C Ras-related protein Rab-5C, at 756377 to 757308 10748 mRNA_2381: 10749 - KOG4660 Protein Mei2, essential for commitment to meiosis, and related proteins, at 757956 to 760560 10749 mRNA_2382: 10750 - HMMPfam-Zinc-binding loop region of homing endonuclease-PF05551,SUPERFAMILY--SSF54060, at 760691 to 762074 10750

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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757,025 - 10748 mRNA_2380 0.70 -1.0
757,303 + -1.8
757,461 - -1.6
757,607 + -2.7
757,630 + -0.3
757,715 - -4.7
757,865 - -3.1
757,877 + -1.4
757,879 - -0.6
757,881 - -3.4
758,352 + 10749 mRNA_2381 0.15 -0.9
759,910 - 10749 mRNA_2381 0.75 -0.9
760,049 - 10749 mRNA_2381 0.80 0.3
760,347 - -1.3
761,121 - 10750 mRNA_2382 0.31 0.0