Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2380

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2379: 10747 - HMMPfam-DASH complex subunit Duo1-PF08651, at 754598 to 756012 10747 mRNA_2380: 10748 - K07889 RAB5C Ras-related protein Rab-5C, at 756377 to 757308 10748 mRNA_2381: 10749 - KOG4660 Protein Mei2, essential for commitment to meiosis, and related proteins, at 757956 to 760560 10749

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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755,397 + 10747 mRNA_2379 0.56 0.3
755,822 + 10747 mRNA_2379 0.87 -0.1
755,838 + 10747 mRNA_2379 0.88 -1.7
756,108 - -1.4
756,300 + -0.2
756,396 - 1.3
756,398 + -1.3
756,723 - 10748 mRNA_2380 0.37 -2.3
757,025 - 10748 mRNA_2380 0.70 -1.0
757,303 + -1.8
757,461 - -1.6
757,607 + -2.7
757,630 + -0.3
757,715 - -4.7
757,865 - -3.1
757,877 + -1.4
757,879 - -0.6
757,881 - -3.4