Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2344

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2343: 10711 - HMMPfam-GPR1/FUN34/yaaH family-PF01184, at 669815 to 670967 10711 mRNA_2344: 10712 - Hypothetical Protein, at 671205 to 671888 10712 mRNA_2345: 10713 - KOG1399 Flavin-containing monooxygenase, at 672144 to 674998 10713

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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670,315 + 10711 mRNA_2343 0.43 -1.7
670,592 + 10711 mRNA_2343 0.67 -2.8
670,904 + -1.3
671,166 + 0.3
671,171 + -0.3
671,242 - -0.6
671,344 - 10712 mRNA_2344 0.20 -2.8
671,589 + 10712 mRNA_2344 0.56 -1.2
671,636 - 10712 mRNA_2344 0.63 -1.5
671,648 + 10712 mRNA_2344 0.65 -0.1
671,669 - 10712 mRNA_2344 0.68 -0.4
671,686 - 10712 mRNA_2344 0.70 -1.2
671,697 - 10712 mRNA_2344 0.72 -1.3
671,711 + 10712 mRNA_2344 0.74 0.2
671,799 - 10712 mRNA_2344 0.87 0.3
671,818 - 10712 mRNA_2344 0.90 -1.6
671,820 + -0.7
671,827 + -0.6
671,829 + -3.5
671,854 - -0.6
671,878 - -1.3
671,928 - -1.0
671,941 + -1.8
671,952 - -1.3
671,980 - -3.1
672,000 + 0.3
672,010 + -0.1
672,022 + -2.0
672,035 - -0.1
672,038 - -0.1
672,043 + 0.6
672,050 + -1.5
672,065 - -1.5
672,086 + -0.4
672,260 + -0.3
672,372 - -1.5