Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2328

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2327: 10695 - Hypothetical Protein, at 616454 to 617684 10695 mRNA_2328: 10696 - KOG0192 Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs, at 617793 to 619842 10696

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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616,936 - 10695 mRNA_2327 0.39 -0.3
617,384 - 10695 mRNA_2327 0.76 -0.4
617,541 + 10695 mRNA_2327 0.88 -2.5
617,660 - 1.6
617,664 + -1.8
617,816 + -1.8
617,983 + -0.3
617,986 + 0.3
618,115 + 10696 mRNA_2328 0.16 1.4
618,138 - 10696 mRNA_2328 0.17 -1.9
618,265 - 10696 mRNA_2328 0.23 -0.8
618,301 + 10696 mRNA_2328 0.25 1.6
618,401 - 10696 mRNA_2328 0.30 0.1
618,431 + 10696 mRNA_2328 0.31 -0.0
618,449 - 10696 mRNA_2328 0.32 -1.3
618,457 + 10696 mRNA_2328 0.32 0.0
618,508 + 10696 mRNA_2328 0.35 -2.4
618,665 - 10696 mRNA_2328 0.43 -0.8
618,841 - 10696 mRNA_2328 0.51 -1.6
618,959 + 10696 mRNA_2328 0.57 -1.9
619,110 + 10696 mRNA_2328 0.64 -2.9
619,189 + 10696 mRNA_2328 0.68 -0.9
619,261 + 10696 mRNA_2328 0.72 -0.5
619,263 + 10696 mRNA_2328 0.72 0.0
619,296 + 10696 mRNA_2328 0.73 -1.4
619,403 - 10696 mRNA_2328 0.79 -0.1
619,603 + 10696 mRNA_2328 0.88 0.4
619,604 - 10696 mRNA_2328 0.88 -2.4
619,690 + 1.6
619,742 + -1.5
619,839 + -0.0
619,999 + -1.4
620,020 + -0.7
620,043 - -1.0
620,114 - -3.0
620,288 - 0.0
620,297 - -0.6
620,619 + -1.5
620,714 - -1.4
620,739 + -0.4