Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2298

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2297: 10665 - HMMPfam-Acyltransferase-PF01553,SMART-Phosphate acyltransferases-SM00563,SUPERFAMILY--SSF69593, at 552680 to 555232 10665 mRNA_2298: 10666 - K15148 MED7 mediator of RNA polymerase II transcription subunit 7, at 555441 to 556485 10666 mRNA_2299: 10667 - Hypothetical Protein, at 557055 to 559337 10667

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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555,638 + 10666 mRNA_2298 0.19 -1.6
555,642 - 10666 mRNA_2298 0.19 -1.2
555,653 - 10666 mRNA_2298 0.20 -2.1
555,653 + 10666 mRNA_2298 0.20 -0.0
556,541 + -2.9
556,659 + -0.5
556,673 - -0.3
556,700 - -1.0
556,852 - -1.4
556,926 - 1.0
556,944 + -1.5
557,102 - -2.2
557,475 + 10667 mRNA_2299 0.18 -0.4