Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2268

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2267: 10635 - K15110 SLC25A21, ODC solute carrier family 25 (mitochondrial 2-oxodicarboxylate transporter), member 21, at 488523 to 490039 10635 mRNA_2268: 10636 - K11215 STE12 transcription factor STE12, at 490121 to 491043 10636 mRNA_2269: 10637 - Hypothetical Protein, at 491612 to 491803 10637

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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489,495 - 10635 mRNA_2267 0.64 -1.4
489,666 + 10635 mRNA_2267 0.75 -2.2
489,879 - 10635 mRNA_2267 0.89 0.0
490,072 + -0.8
490,197 + -0.1
490,208 - -4.5
490,361 - 10636 mRNA_2268 0.26 -3.6
490,362 + 10636 mRNA_2268 0.26 -0.5
490,517 - 10636 mRNA_2268 0.43 -1.2
490,649 - 10636 mRNA_2268 0.57 -1.0
490,658 + 10636 mRNA_2268 0.58 -3.2
490,790 - 10636 mRNA_2268 0.72 -2.2
490,798 - 10636 mRNA_2268 0.73 0.7
490,850 - 10636 mRNA_2268 0.79 -2.5
490,932 + 10636 mRNA_2268 0.88 -0.8
490,944 - 10636 mRNA_2268 0.89 0.9
490,952 - -0.8
490,965 + -0.5
491,104 - -1.4
491,104 - -3.3
491,105 + -2.1
491,109 + 0.3
491,117 - 0.3
491,118 + -0.8
491,120 + -2.1
491,124 - -1.2
491,124 - -2.8
491,135 + -0.9
491,137 - -0.6
491,138 - -0.0
491,139 + -1.6
491,139 + 0.4
491,139 - 0.6
491,140 - -2.5
491,141 - -0.7
491,143 + -2.3
491,144 - -1.0
491,144 - 0.3
491,146 + -0.7
491,155 + 1.4
491,158 - -3.3
491,158 + 0.3
491,162 + -0.3
491,201 + -1.0
491,203 + -0.1
491,208 + -2.1
491,209 + -0.6
491,218 - -2.0
491,218 + -0.5
491,219 + -0.4
491,220 - -0.8
491,220 + -1.1
491,222 - 0.2
491,228 + -1.0
491,321 - -0.4
491,350 - -1.6
491,377 + 0.2
491,399 + 1.3
491,534 - -3.0
491,535 + -1.6
491,552 + -0.1