Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2250

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2249: 10617 - K10753 ASF1 histone chaperone ASF1, at 463565 to 464577 10617 mRNA_2250: 10618 - HMMPfam-Apolipoprotein O-PF09769, at 464729 to 465798 10618 mRNA_2251: 10619 - KOG3313 Molecular chaperone Prefoldin, subunit 3, at 466202 to 467815 10619

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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464,631 + -0.1
464,640 + -2.8
464,649 - -1.6
464,651 + -2.9
464,655 + -0.6
464,658 + -2.8
464,661 + -0.8
464,668 - -0.1
464,835 - -0.3
464,835 - -4.1
464,840 + 10618 mRNA_2250 0.10 -2.5
464,844 + 10618 mRNA_2250 0.11 -0.9
464,845 - 10618 mRNA_2250 0.11 -0.6
464,845 - 10618 mRNA_2250 0.11 0.4
465,007 + 10618 mRNA_2250 0.26 -0.6
465,142 - 10618 mRNA_2250 0.39 -0.7
465,280 - 10618 mRNA_2250 0.51 -2.6
465,325 + 10618 mRNA_2250 0.56 -0.7
465,446 - 10618 mRNA_2250 0.67 -1.3
465,560 - 10618 mRNA_2250 0.78 -1.4
465,572 + 10618 mRNA_2250 0.79 0.9
465,572 + 10618 mRNA_2250 0.79 -2.0
465,736 - -2.1
465,742 + -1.5
465,744 + -2.3
465,992 + -1.1
465,993 - -2.0
466,010 + -1.3
466,029 - -1.4
466,142 - -1.5
466,158 + -1.6
466,699 + 10619 mRNA_2251 0.31 -3.3
466,777 + 10619 mRNA_2251 0.36 -2.0