Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2169

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2168: 10536 - Hypothetical Protein, at 237845 to 238808 10536 mRNA_2169: 10537 - Hypothetical Protein, at 239219 to 240668 10537 mRNA_2170: 10538 - K20294 COG7 conserved oligomeric Golgi complex subunit 7, at 240753 to 243794 10538

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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238,355 - 10536 mRNA_2168 0.53 -2.8
238,401 + 10536 mRNA_2168 0.58 -1.0
238,421 - 10536 mRNA_2168 0.60 -1.4
238,525 - 10536 mRNA_2168 0.71 0.3
238,656 + 10536 mRNA_2168 0.84 0.0
238,665 + 10536 mRNA_2168 0.85 -0.6
238,670 - 10536 mRNA_2168 0.86 -0.1
238,705 - 10536 mRNA_2168 0.89 -1.0
238,947 - -2.7
238,958 + -0.3
239,120 + -1.8
239,125 - -2.3
239,360 - -0.9
239,387 - 10537 mRNA_2169 0.12 -1.4
239,419 + 10537 mRNA_2169 0.14 -0.7
239,550 + 10537 mRNA_2169 0.23 -3.6
239,734 + 10537 mRNA_2169 0.36 -2.6
239,844 + 10537 mRNA_2169 0.43 -0.8
239,905 - 10537 mRNA_2169 0.47 1.7
240,128 + 10537 mRNA_2169 0.63 -0.1
240,181 - 10537 mRNA_2169 0.66 -4.7
240,277 - 10537 mRNA_2169 0.73 -0.5
240,336 - 10537 mRNA_2169 0.77 -3.6
240,438 - 10537 mRNA_2169 0.84 1.3
240,602 + -1.4
240,823 - -2.3
240,909 + -1.7
240,914 + -1.6
241,049 + -2.6
241,314 + 10538 mRNA_2170 0.18 -1.2
241,632 - 10538 mRNA_2170 0.29 -1.2
241,657 + 10538 mRNA_2170 0.30 -4.4