Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2155

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2154: 10522 - KOG2689 Predicted ubiquitin regulatory protein, at 202744 to 204130 10522 mRNA_2155: 10523 - Hypothetical Protein, at 204490 to 205403 10523 mRNA_2156: 10524 - Hypothetical Protein, at 205940 to 207081 10524

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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203,528 - 10522 mRNA_2154 0.57 -1.0
203,603 - 10522 mRNA_2154 0.62 -0.9
203,841 + 10522 mRNA_2154 0.79 -0.8
203,911 + 10522 mRNA_2154 0.84 -1.3
204,211 - 1.4
204,304 + -1.7
204,319 - -4.3
204,599 + 10523 mRNA_2155 0.12 -2.6
204,669 + 10523 mRNA_2155 0.20 -0.1
204,707 + 10523 mRNA_2155 0.24 -2.1
204,711 + 10523 mRNA_2155 0.24 -1.9
204,739 - 10523 mRNA_2155 0.27 0.2
204,854 - 10523 mRNA_2155 0.40 0.2
205,122 + 10523 mRNA_2155 0.69 -1.3
205,131 - 10523 mRNA_2155 0.70 -0.2
205,178 + 10523 mRNA_2155 0.75 -1.2
205,210 + 10523 mRNA_2155 0.79 -0.8
205,302 + 10523 mRNA_2155 0.89 -1.1
205,453 - -2.9
205,556 + -2.2
205,635 + -0.4
205,705 - -1.0
205,740 + 0.4
205,740 + -1.6
205,749 + -1.9
206,047 + -0.6