Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2151

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2150: 10518 - Hypothetical Protein, at 192227 to 192680 10518 mRNA_2151: 10519 - K03348 APC1 anaphase-promoting complex subunit 1, at 192914 to 199163 10519 mRNA_2152: 10520 - KOG2887 Membrane protein involved in ER to Golgi transport, at 199277 to 200467 10520

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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192,076 + 1.9
192,078 + -2.9
192,220 + -0.9
192,653 + -0.3
192,934 - -3.3
194,095 - 10519 mRNA_2151 0.19 -2.2
194,126 - 10519 mRNA_2151 0.19 -0.5
194,281 - 10519 mRNA_2151 0.22 -1.2
194,397 + 10519 mRNA_2151 0.24 -2.2
194,592 + 10519 mRNA_2151 0.27 -0.3
194,681 + 10519 mRNA_2151 0.28 0.0
194,803 - 10519 mRNA_2151 0.30 -1.0
194,836 - 10519 mRNA_2151 0.31 -1.4
197,996 - 10519 mRNA_2151 0.81 -1.9
198,918 + 0.8
199,186 + -2.4
199,189 - -2.3
199,296 + -0.4
199,620 + 10520 mRNA_2152 0.29 -3.4
199,625 + 10520 mRNA_2152 0.29 -2.9
199,780 + 10520 mRNA_2152 0.42 -1.1
199,793 - 10520 mRNA_2152 0.43 -1.2
199,914 - 10520 mRNA_2152 0.53 -3.1
200,040 - 10520 mRNA_2152 0.64 -2.6
200,047 + 10520 mRNA_2152 0.65 -2.0
200,049 + 10520 mRNA_2152 0.65 -2.1