Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2131

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2131: 10499 - K09580 PDIA1, P4HB protein disulfide-isomerase A1, at 141323 to 143619 10499 mRNA_2132: 10500 - Hypothetical Protein, at 144026 to 145888 10500

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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140,337 + -2.0
140,419 - -0.3
140,537 + -1.0
140,678 + -0.0
140,734 + -0.7
140,734 + -2.4
140,768 - 0.3
140,883 + 0.3
140,885 - 0.3
140,888 + -0.2
140,899 - -2.7
141,202 + -2.9
141,232 + -2.0
141,315 - -1.3
141,912 - 10499 mRNA_2131 0.26 -1.3
142,197 - 10499 mRNA_2131 0.38 -0.0
142,765 + 10499 mRNA_2131 0.63 -1.4
142,773 - 10499 mRNA_2131 0.63 -0.8
143,345 - 10499 mRNA_2131 0.88 -1.9
143,404 - 1.5
143,629 + 0.1
143,660 - -0.9
143,682 + -2.9
143,690 + 0.5
143,754 - -1.8
143,816 - -1.4
143,824 - 1.1
143,825 + -1.5
143,835 - -3.0
143,843 + -2.9
143,844 + 0.8
143,916 - -2.1
143,961 - -3.1
143,966 + -2.5
144,074 - -3.9
144,099 - -0.0
144,099 + 1.2
144,105 - -2.3
144,112 - -0.4
144,571 - 10500 mRNA_2132 0.29 0.9