Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2126

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2125: 10493 - BLAST BA75_02480T0 [Komagataella pastoris], at 129988 to 130716 10493 mRNA_2126: 10494 - Hypothetical Protein, at 130943 to 133180 10494 mRNA_2127: 10495 - BLAST putative lipase ATG15 [Grifola frondosa], at 133530 to 135409 10495

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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130,067 - 10493 mRNA_2125 0.11 -2.6
130,067 - 10493 mRNA_2125 0.11 0.4
130,114 + 10493 mRNA_2125 0.17 -1.2
130,133 + 10493 mRNA_2125 0.20 -1.8
130,209 - 10493 mRNA_2125 0.30 -0.4
130,325 + 10493 mRNA_2125 0.46 -0.2
130,366 - 10493 mRNA_2125 0.52 0.2
130,486 - 10493 mRNA_2125 0.68 0.0
130,655 + 0.2
130,813 + -1.9
130,824 + 0.2
130,831 - -0.1
130,835 + 0.3
130,950 - -1.0
131,123 + 0.6
131,469 + 10494 mRNA_2126 0.24 -3.2
131,590 + 10494 mRNA_2126 0.29 -0.5
131,653 - 10494 mRNA_2126 0.32 0.9
132,136 - 10494 mRNA_2126 0.53 -0.3
132,535 - 10494 mRNA_2126 0.71 -1.0
132,853 + 10494 mRNA_2126 0.85 -2.2
133,104 + -1.4
133,114 - -3.7
133,286 + 0.1
133,451 - -0.1
133,453 + -1.6
133,735 + 10495 mRNA_2127 0.11 0.0
133,743 + 10495 mRNA_2127 0.11 -1.4
133,847 + 10495 mRNA_2127 0.17 -2.3
133,883 - 10495 mRNA_2127 0.19 -2.1