Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2123

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2122: 10490 - K00103 GULO L-gulonolactone oxidase, at 124559 to 126866 10490 mRNA_2123: 10491 - HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,SUPERFAMILY--SSF50685, at 127215 to 128574 10491 mRNA_2124: 10492 - Hypothetical Protein, at 128635 to 129596 10492

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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126,270 - 10490 mRNA_2122 0.74 -1.0
126,440 + 10490 mRNA_2122 0.81 -3.0
126,861 + -2.7
126,861 - 0.7
127,144 - -1.8
127,149 + 0.2
127,273 - -1.4
127,582 - 10491 mRNA_2123 0.27 -2.7
127,696 - 10491 mRNA_2123 0.35 0.0
127,782 + 10491 mRNA_2123 0.42 -1.5
127,865 - 10491 mRNA_2123 0.48 -1.2
128,002 + 10491 mRNA_2123 0.58 -1.1
128,456 + -2.3
128,484 + -2.6
128,789 - 10492 mRNA_2124 0.16 -0.7
128,874 - 10492 mRNA_2124 0.25 -1.7
128,874 - 10492 mRNA_2124 0.25 -1.6
129,047 + 10492 mRNA_2124 0.43 -0.8
129,074 - 10492 mRNA_2124 0.46 -0.3
129,203 + 10492 mRNA_2124 0.59 -0.5
129,230 + 10492 mRNA_2124 0.62 -2.1