Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2097

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2096: 10464 - K05754 ARPC5 actin related protein 2/3 complex, subunit 5, at 59907 to 60818 10464 mRNA_2097: 10465 - K03217 yidC, spoIIIJ, OXA1, ccfA YidC/Oxa1 family membrane protein insertase, at 61470 to 63350 10465 mRNA_2098: 10466 - Hypothetical Protein, at 63765 to 64899 10466

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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60,826 - -1.0
60,829 + -0.9
60,835 - -1.5
60,849 + -1.9
61,005 - -0.5
61,011 - -3.7
61,027 + 1.0
61,044 + -0.2
61,079 - -1.0
61,134 - -1.5
61,143 + 0.9
61,179 - 0.7
61,197 + 0.0
61,203 + 0.3
61,206 - -2.1
61,381 - 0.8
61,410 + -1.4
61,428 - -1.2
61,435 + -2.2
61,526 - -1.6
63,060 + 10465 mRNA_2097 0.85 -3.1
63,318 + -0.3
63,600 + -2.3
63,613 + -0.4
63,642 - -2.6
63,717 - -0.7
63,804 + -0.7
63,889 - 10466 mRNA_2098 0.11 0.0
63,907 + 10466 mRNA_2098 0.13 -0.6
64,107 + 10466 mRNA_2098 0.30 -1.6