Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2074

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2073: 10441 - Hypothetical Protein, at 8998 to 9576 10441 mRNA_2074: 10442 - HMMPfam-Chromate transporter-PF02417, at 9879 to 11848 10442

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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8,884 - -2.7
8,887 + -5.3
8,889 + -3.5
8,899 - -1.4
8,902 + -0.4
8,904 + -3.7
9,068 - 10441 mRNA_2073 0.12 -2.7
9,479 + 10441 mRNA_2073 0.83 1.1
9,483 - 10441 mRNA_2073 0.84 -2.7
9,487 - 10441 mRNA_2073 0.84 -1.3
9,623 + -0.8
9,739 - -0.0
9,785 - -1.3
9,788 - -0.6
9,788 - -1.8
9,936 + -1.3
10,090 - 10442 mRNA_2074 0.11 -0.9
10,272 + 10442 mRNA_2074 0.20 0.2
11,852 - -2.0
12,047 + -0.1
12,269 - 0.0
12,274 + -2.8
12,274 - 1.0
12,281 - 0.2
12,287 + -2.2
12,292 + -2.8
12,420 + -1.2
12,431 + -2.0
12,581 - -1.7