Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2034

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2033: 10401 - K09595 HM13 minor histocompatibility antigen H13, at 796887 to 798543 10401 mRNA_2034: 10402 - HMMPfam-Spherulation-specific family 4-PF12138, at 799369 to 800999 10402 mRNA_2035: 10403 - K14824 ERB1, BOP1 ribosome biogenesis protein ERB1, at 801171 to 804014 10403

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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798,432 + -1.9
798,557 + -0.3
798,558 - -0.9
798,570 - 1.0
798,581 - -0.4
798,683 - -2.4
798,723 + -0.5
798,898 + 0.9
798,929 - -0.6
799,017 + -0.9
799,042 + -1.5
799,180 - -1.1
799,195 + -0.7
799,247 + -2.1
799,274 + -2.0
799,339 + -2.5
799,461 + -1.9
799,493 + -0.0
799,522 - -1.5
799,904 + 10402 mRNA_2034 0.33 0.7
799,924 - 10402 mRNA_2034 0.34 0.5
800,003 + 10402 mRNA_2034 0.39 -1.7
800,700 + 10402 mRNA_2034 0.82 0.1
800,989 - -1.7