Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1979

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1978: 10346 - K14409 SMG7, EST1C protein SMG7, at 657847 to 661571 10346 mRNA_1979: 10347 - KOG2362 Uncharacterized Fe-S protein, at 661978 to 663393 10347 mRNA_1980: 10348 - KOG3436 60S ribosomal protein L35, at 663794 to 664282 10348

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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661,066 - 10346 mRNA_1978 0.86 -0.3
661,190 + 10346 mRNA_1978 0.90 0.5
662,067 + -2.5
662,110 + -2.6
662,254 - 10347 mRNA_1979 0.19 -2.1
662,799 + 10347 mRNA_1979 0.58 -1.1
662,952 + 10347 mRNA_1979 0.69 1.0
662,970 + 10347 mRNA_1979 0.70 0.1
663,104 - 10347 mRNA_1979 0.80 -2.0
663,125 - 10347 mRNA_1979 0.81 -0.1
663,135 - 10347 mRNA_1979 0.82 -1.0
663,306 + -2.5
663,419 - 0.1
663,735 + 1.1