Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1970

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1969: 10337 - K14961 RBBP5, SWD1, CPS50 COMPASS component SWD1, at 635638 to 637721 10337 mRNA_1970: 10338 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 638087 to 640268 10338

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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637,606 - 0.2
637,873 - 0.4
637,896 - -1.7
637,905 - -0.9
638,024 - -2.3
638,144 - 0.9
638,189 + -1.0
638,460 + 10338 mRNA_1970 0.17 -0.4
638,461 + 10338 mRNA_1970 0.17 -1.3
638,658 + 10338 mRNA_1970 0.26 -1.1
638,904 - 10338 mRNA_1970 0.37 -1.7
639,463 - 10338 mRNA_1970 0.63 -4.2
639,476 - 10338 mRNA_1970 0.64 -1.9
639,600 - 10338 mRNA_1970 0.69 -1.9
639,603 - 10338 mRNA_1970 0.69 -0.7
639,773 + 10338 mRNA_1970 0.77 -0.0
639,909 + 10338 mRNA_1970 0.84 -1.1
639,926 - 10338 mRNA_1970 0.84 -2.4
640,072 - -3.4
640,202 - -1.3
640,205 - -0.8
640,207 - -3.3
640,222 + 0.7
640,230 + -1.9
640,238 + -0.4
640,242 + 0.2
640,245 + -1.2
640,349 - -0.6
640,369 - -1.8
640,371 - 0.4
640,374 + -1.3
640,377 + -0.5
640,379 + 0.2
640,385 + -1.0
640,423 - 0.3
640,491 - 1.3
640,510 - -0.6
640,534 + -1.5
640,656 - 2.0
640,795 + -1.2
640,832 + 0.5
641,113 + 1.0
641,222 + 0.9
641,241 - -2.0
641,266 + -2.2