Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1955

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1954: 10322 - Hypothetical Protein, at 601425 to 602462 10322 mRNA_1955: 10323 - KOG0379 Kelch repeat-containing proteins, at 603461 to 605817 10323

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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602,471 - 0.6
602,512 + 0.4
603,050 + -0.9
603,052 - 1.1
603,345 - -1.7
603,362 - -0.3
603,385 + -1.2
603,496 - -2.2
604,343 + 10323 mRNA_1955 0.37 -3.4
604,645 + 10323 mRNA_1955 0.50 -2.5
604,656 + 10323 mRNA_1955 0.51 1.2
604,680 + 10323 mRNA_1955 0.52 -2.3
604,770 + 10323 mRNA_1955 0.56 -1.0
604,785 + 10323 mRNA_1955 0.56 -0.5
605,004 - 10323 mRNA_1955 0.65 -0.1
605,235 - 10323 mRNA_1955 0.75 -2.0
605,941 - -2.3
606,122 + -1.3
606,243 - -3.0
606,372 + -0.6
606,388 - -1.9
606,407 + -1.0
606,410 + 0.5
606,541 + -3.0
606,542 + 0.3
606,542 - -0.2
606,551 - 1.0
606,594 + 0.5
606,680 - -1.4
606,704 - 0.4
606,710 + -1.2