Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1949

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1948: 10316 - K08176 PHO84 MFS transporter, PHS family, inorganic phosphate transporter, at 580409 to 582858 10316 mRNA_1949: 10317 - KOG0254 Predicted transporter (major facilitator superfamily), at 583350 to 585589 10317

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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582,858 + 1.5
582,866 + 1.4
582,871 - -0.0
582,882 + -0.9
583,075 + -0.3
583,127 - 0.4
583,402 + 0.3
583,847 + 10317 mRNA_1949 0.22 1.1
584,446 - 10317 mRNA_1949 0.49 -1.0
585,015 + 10317 mRNA_1949 0.74 0.1
585,282 + 10317 mRNA_1949 0.86 -2.4
585,282 + 10317 mRNA_1949 0.86 -3.9
585,283 - 10317 mRNA_1949 0.86 0.4
585,297 - 10317 mRNA_1949 0.87 -0.8
585,426 - -1.1
585,427 + -0.1
585,436 - 0.1
585,450 + -1.3
585,455 - -0.8
585,460 + -4.1
585,469 + -3.3
585,584 - -0.4
585,595 - 0.5
585,599 - -4.3
585,729 - -0.9
585,737 - -2.7
585,947 + -0.7
586,188 - -2.2