Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1870

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1869: 10237 - K14570 REX1, REXO1, RNH70 RNA exonuclease 1, at 404642 to 406231 10237 mRNA_1870: 10238 - K18043 OCA1 tyrosine-protein phosphatase OCA1, at 406751 to 407606 10238 mRNA_1871: 10239 - K14855 RSA4, NLE1 ribosome assembly protein 4, at 407656 to 409995 10239

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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406,521 - -1.7
406,541 + -0.0
406,657 - -2.9
406,689 - -1.7
406,704 - -0.4
406,706 + 0.3
406,972 + 10238 mRNA_1870 0.26 -2.9
407,587 - -3.3
407,733 + -2.0