Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1834

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1833: 10201 - Hypothetical Protein, at 322426 to 322877 10201 mRNA_1834: 10202 - Hypothetical Protein, at 323054 to 324268 10202 mRNA_1835: 10203 - K10601 SYVN1, HRD1 E3 ubiquitin-protein ligase synoviolin, at 324649 to 327501 10203

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
322,153 - -4.1
322,181 + -1.3
322,184 + -1.3
322,191 + -1.6
322,194 + -2.1
322,194 + -0.9
322,224 + -0.7
322,235 - 0.2
322,329 - -0.1
322,334 + -1.1
322,481 - 10201 mRNA_1833 0.12 -1.2
322,884 + -2.3
322,904 + -1.4
323,235 + 10202 mRNA_1834 0.15 -1.9
323,273 + 10202 mRNA_1834 0.18 0.1
323,354 - 10202 mRNA_1834 0.25 0.5
323,369 - 10202 mRNA_1834 0.26 -1.1
323,983 - 10202 mRNA_1834 0.76 -0.2
324,373 - -1.2
324,383 - -1.2
324,813 + -2.7
325,115 - 10203 mRNA_1835 0.16 0.7