Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1832

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1831: 10199 - KOG3274 Uncharacterized conserved protein, AMMECR1, at 318985 to 319920 10199 mRNA_1832: 10200 - K11188 PRDX6 peroxiredoxin 6, 1-Cys peroxiredoxin, at 320371 to 321858 10200 mRNA_1833: 10201 - Hypothetical Protein, at 322426 to 322877 10201

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
319,554 + 10199 mRNA_1831 0.61 -2.0
319,679 + 10199 mRNA_1831 0.74 -0.7
319,841 - -4.2
319,843 - 2.7
319,925 + -0.9
319,982 - -1.4
319,989 - -1.5
319,991 + -3.1
319,991 + -4.1
320,002 - -3.4
320,003 - -2.4
320,008 + -2.9
320,038 + -1.3
320,043 + -2.0
320,069 + -0.3
320,088 - 0.0
320,094 - -2.0
320,105 + -1.2
320,111 - 0.9
320,111 + -0.9
320,118 + -3.0
320,126 + -1.2
320,133 - -1.4
320,136 - -0.6
320,136 - -0.4
320,137 + -0.0
320,139 - -0.7
320,140 + 0.8
320,141 - -1.7
320,143 - -1.2
320,149 - -1.1
320,166 + -2.0
320,288 + 0.1
320,310 + -0.7
320,871 + 10200 mRNA_1832 0.34 -2.4
320,916 - 10200 mRNA_1832 0.37 -0.5
321,001 - 10200 mRNA_1832 0.42 1.2
321,041 - 10200 mRNA_1832 0.45 -0.7
321,047 + 10200 mRNA_1832 0.45 -2.2
321,889 + -3.8
321,904 + -1.7
321,916 - -2.1
321,925 - -0.1
321,942 - -1.3
321,998 + -1.2
322,017 - -1.9
322,028 - -0.3
322,028 - 0.0
322,033 + -0.5
322,046 + -0.8
322,047 + -1.4
322,153 - -4.1
322,181 + -1.3
322,184 + -1.3
322,191 + -1.6
322,194 + -2.1
322,194 + -0.9
322,224 + -0.7
322,235 - 0.2
322,329 - -0.1
322,334 + -1.1
322,481 - 10201 mRNA_1833 0.12 -1.2