Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1794

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1792: 10160 - Hypothetical Protein, at 214724 to 215217 10160 mRNA_1793: 10161 - K02867 RP-L11, MRPL11, rplK large subunit ribosomal protein L11, at 215281 to 215917 10161 mRNA_1794: 10162 - BLAST peroxisomal membrane anchor protein [Aspergillus ..., at 216016 to 217175 10162 mRNA_1795: 10163 - K12844 PRPF31 U4/U6 small nuclear ribonucleoprotein PRP31, at 217358 to 219404 10163

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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215,096 - 10160 mRNA_1792 0.75 -2.8
215,096 - 10160 mRNA_1792 0.75 -1.7
215,107 - 10160 mRNA_1792 0.78 -0.1
215,220 + -0.1
216,013 - -1.0
216,102 + 0.5
216,117 - -0.4
216,117 + -0.7
216,256 - 10162 mRNA_1794 0.21 -2.7
216,302 + 10162 mRNA_1794 0.25 -0.4
216,728 - 10162 mRNA_1794 0.61 -0.2
216,769 - 10162 mRNA_1794 0.65 -2.1
216,914 + 10162 mRNA_1794 0.77 -2.2
217,141 - -0.3
217,147 - -0.5