Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1784

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1784: 10152 - KOG0257 Kynurenine aminotransferase, glutamine transaminase K, at 201521 to 204096 10152 mRNA_1785: 10153 - K04077 groEL, HSPD1 chaperonin GroEL, at 204844 to 206779 10153

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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200,556 - -1.6
200,814 - -0.9
200,845 - -0.2
201,002 - -1.3
201,003 + -0.8
201,145 - 0.1
201,150 + -0.7
201,152 + -1.7
201,312 + -2.3
201,332 - -0.0
201,336 - 0.6
201,411 - -1.3
201,412 + -2.4
201,412 + 0.0
201,453 - -0.0
201,459 - -0.6
201,461 + -3.2
201,596 - -1.1
201,650 + -2.7
201,753 - 1.0
201,763 - -0.3
201,766 + 0.2
202,370 - 10152 mRNA_1784 0.33 -2.6
202,579 - 10152 mRNA_1784 0.41 -0.6
202,655 + 10152 mRNA_1784 0.44 -1.7
203,005 + 10152 mRNA_1784 0.58 -1.4
203,014 + 10152 mRNA_1784 0.58 -0.8
203,208 - 10152 mRNA_1784 0.65 -3.8
203,373 + 10152 mRNA_1784 0.72 -2.9
203,509 - 10152 mRNA_1784 0.77 -1.8
203,634 - 10152 mRNA_1784 0.82 -1.9
203,645 + 10152 mRNA_1784 0.82 -2.9
204,095 + -2.3
204,308 + 0.9
204,365 + -0.4
204,369 - 0.8
204,403 - -2.6