Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1781

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1781: 10149 - K15109 SLC25A20_29, CACT, CACL, CRC1 solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29, at 191396 to 193155 10149 mRNA_1782: 10150 - Hypothetical Protein, at 193433 to 193902 10150

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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190,486 - -1.1
190,487 - -0.1
190,758 + 2.5
190,788 - -0.5
190,792 + -0.6
190,797 - -0.1
190,920 + -3.1
190,923 - -0.6
191,067 - -1.0
191,067 - -0.9
191,225 + -2.6
191,333 - 0.0
191,363 - -1.0
191,518 - -5.2
191,540 + -1.0
191,929 - 10149 mRNA_1781 0.30 -0.6
192,403 - 10149 mRNA_1781 0.57 0.5
192,799 + 10149 mRNA_1781 0.80 -1.1
192,843 - 10149 mRNA_1781 0.82 -0.6
192,960 + 10149 mRNA_1781 0.89 -1.0
193,067 - -1.1
193,861 + -3.1
193,989 - -0.8