Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1768

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1767: 10135 - HMMPfam-F-box-like-PF12937, at 154773 to 156142 10135 mRNA_1768: 10136 - K01858 INO1, ISYNA1 myo-inositol-1-phosphate synthase, at 156346 to 158351 10136 mRNA_1769: 10137 - Interpro F-box-like 0, at 159108 to 161176 10137

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
155,889 - 10135 mRNA_1767 0.81 -3.6
155,896 - 10135 mRNA_1767 0.82 -3.1
155,922 + 10135 mRNA_1767 0.84 0.5
155,995 - 10135 mRNA_1767 0.89 -0.4
155,998 - 10135 mRNA_1767 0.89 0.4
156,003 + 10135 mRNA_1767 0.90 -2.8
156,026 + -0.9
156,175 + -0.4
156,185 - -2.9
156,188 + -0.4
156,221 - -2.0
156,323 - -1.6
156,342 + -1.8
156,385 - -1.6
156,471 - -1.1
156,553 - 10136 mRNA_1768 0.10 -2.0
156,564 + 10136 mRNA_1768 0.11 -0.9
156,594 - 10136 mRNA_1768 0.12 -3.2
156,611 + 10136 mRNA_1768 0.13 -2.5
156,802 + 10136 mRNA_1768 0.23 -2.2
157,183 - 10136 mRNA_1768 0.42 -1.0
157,228 + 10136 mRNA_1768 0.44 0.7
157,331 + 10136 mRNA_1768 0.49 -2.4
157,527 - 10136 mRNA_1768 0.59 -1.4
157,642 - 10136 mRNA_1768 0.65 -0.6
157,808 - 10136 mRNA_1768 0.73 -0.8
157,837 + 10136 mRNA_1768 0.74 -3.3
157,992 + 10136 mRNA_1768 0.82 -0.3
158,107 - 10136 mRNA_1768 0.88 -0.9
158,117 + 10136 mRNA_1768 0.88 0.2
158,121 - 10136 mRNA_1768 0.88 -0.9
158,230 - -1.8
158,550 + -2.9
158,554 + -0.9
158,571 + -1.0
158,585 + 0.4
158,671 + -4.2
158,704 - -0.3
158,711 - -1.7
158,724 - -1.3
158,736 - -0.0
158,738 + -1.9
158,741 + -0.3
158,758 + -2.3
158,834 - -2.3
158,845 - -0.9
158,856 + -0.3
158,859 - -0.5
158,867 - -0.6
158,867 + -0.3
158,875 + -2.2
158,879 - -2.3
158,879 + -0.8
158,900 + -1.6
158,901 - -2.7
158,914 + -3.3
158,915 - -1.5
158,976 - -2.2
158,981 + -1.6
158,982 - -1.2
158,987 + -1.4
158,988 - 0.1
158,992 - -0.4
158,995 + -0.6
158,999 + -2.3
159,001 - -0.7
159,010 - 0.7
159,011 + -1.0
159,017 + -1.2
159,022 + -1.9
159,036 + 0.8
159,036 + -1.5
159,042 + -2.9
159,055 + -0.2
159,183 - 0.4
159,225 + -0.3
159,329 - 10137 mRNA_1769 0.11 -0.2
159,339 - 10137 mRNA_1769 0.11 -1.2
159,348 + 10137 mRNA_1769 0.12 -1.5