Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1766

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1766: 10134 - K03097 CSNK2A casein kinase II subunit alpha, at 151982 to 154408 10134 mRNA_1767: 10135 - HMMPfam-F-box-like-PF12937, at 154773 to 156142 10135

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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151,019 - -1.2
151,027 - 0.6
151,035 + -2.0
151,129 + -1.6
151,146 + -1.3
151,157 + -0.3
151,163 + -2.4
151,168 + 0.2
151,545 + -0.0
151,566 + 0.1
151,566 - -2.0
151,595 + -1.5
151,748 + 1.2
151,749 - -0.5
151,896 + -2.4
151,907 + -0.5
151,912 + -1.3
152,169 - -0.9
152,183 - -2.4
152,200 + -0.8
152,767 + 10134 mRNA_1766 0.32 -0.5
152,782 - 10134 mRNA_1766 0.33 -0.6
153,058 - 10134 mRNA_1766 0.44 -1.8
153,247 - 10134 mRNA_1766 0.52 0.6
153,254 + 10134 mRNA_1766 0.52 -4.2
153,351 + 10134 mRNA_1766 0.56 -0.1
153,649 - 10134 mRNA_1766 0.69 -0.2
153,823 + 10134 mRNA_1766 0.76 0.2
153,876 + 10134 mRNA_1766 0.78 0.5
153,942 + 10134 mRNA_1766 0.81 -3.0
154,279 - -3.1
154,316 + -1.2
154,510 + -1.5
154,553 - -0.8
154,553 - -1.9
154,553 - 0.3
154,634 + 0.5
154,640 + -1.3
154,676 - -0.5
154,984 - 10135 mRNA_1767 0.15 0.4
155,128 - 10135 mRNA_1767 0.26 -2.3