Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1761

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1761: 10129 - K07189 PPP1R3 protein phosphatase 1 regulatory subunit 3A/B/C/D/E, at 141827 to 142144 10129 mRNA_1762: 10130 - Hypothetical Protein, at 142717 to 145078 10130

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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140,946 + 0.4
141,087 + -3.6
141,224 - -1.8
141,231 - -3.6
141,247 - -2.1
141,560 - -1.5
141,936 + 10129 mRNA_1761 0.34 -2.3
141,959 + 10129 mRNA_1761 0.42 -1.2
141,993 + 10129 mRNA_1761 0.52 -0.9
142,241 + 0.1
142,509 - -1.0
142,567 - -0.7
142,586 - -1.7
142,594 - 0.1
142,622 + -1.1
142,630 - -1.7
142,641 - -1.2
142,649 - -3.8
142,661 + -0.1
142,673 + -1.8
142,693 - -4.2
142,772 - -2.8
142,918 + -2.1
142,966 - 10130 mRNA_1762 0.11 -4.1
142,980 + 10130 mRNA_1762 0.11 -1.7