Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1752

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1751: 10119 - KOG2726 Mitochondrial polypeptide chain release factor, at 114675 to 115608 10119 mRNA_1752: 10120 - K15363 FAN1, MTMR15 fanconi-associated nuclease 1, at 115772 to 119229 10120 mRNA_1753: 10121 - BLAST ubiquitin ligase SCF complex subunit Cullin [Rhizocto..., at 119508 to 121647 10121

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
114,931 - 10119 mRNA_1751 0.27 -1.6
114,946 + 10119 mRNA_1751 0.29 0.2
115,808 + -0.2
116,310 + 10120 mRNA_1752 0.16 -3.2
116,334 - 10120 mRNA_1752 0.16 -0.0
116,390 + 10120 mRNA_1752 0.18 -1.4
116,779 - 10120 mRNA_1752 0.29 0.4
116,809 + 10120 mRNA_1752 0.30 -0.1
116,904 + 10120 mRNA_1752 0.33 -1.2
116,945 + 10120 mRNA_1752 0.34 -0.2
116,956 + 10120 mRNA_1752 0.34 -0.1
116,996 - 10120 mRNA_1752 0.35 -0.1
117,139 + 10120 mRNA_1752 0.40 -0.7
117,296 - 10120 mRNA_1752 0.44 -0.7
117,300 + 10120 mRNA_1752 0.44 -2.1
117,404 + 10120 mRNA_1752 0.47 -1.8
117,425 + 10120 mRNA_1752 0.48 -3.0
117,558 - 10120 mRNA_1752 0.52 -1.8
117,593 + 10120 mRNA_1752 0.53 -1.1
117,993 + 10120 mRNA_1752 0.64 -3.6
118,445 + 10120 mRNA_1752 0.77 -0.2
118,849 + 10120 mRNA_1752 0.89 -0.6
119,011 - -0.9
119,018 + -1.6
119,020 - -0.7
119,155 + -0.1
119,233 - -0.4
119,282 - -1.6
119,312 + -1.2
119,314 + -2.7
119,330 - -1.6
119,343 + -1.1
119,444 - -0.1
119,446 - -2.6
119,459 + -2.4
119,470 + -0.6
119,604 + -1.3
119,729 - 10121 mRNA_1753 0.10 -0.7
119,733 - 10121 mRNA_1753 0.11 -0.9
119,734 - 10121 mRNA_1753 0.11 2.0
119,884 + 10121 mRNA_1753 0.18 -0.8
119,884 + 10121 mRNA_1753 0.18 -1.6
119,893 + 10121 mRNA_1753 0.18 -3.0
119,934 - 10121 mRNA_1753 0.20 -2.8
119,992 - 10121 mRNA_1753 0.23 -2.2
120,013 - 10121 mRNA_1753 0.24 -1.0