Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1743

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1742: 10110 - SUPERFAMILY--SSF48097, at 94671 to 96223 10110 mRNA_1743: 10111 - HMMPfam-Protein of unknown function DUF262-PF03235, at 96619 to 100637 10111 mRNA_1744: 10112 - Hypothetical Protein, at 100843 to 102379 10112

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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95,641 + 10110 mRNA_1742 0.62 -0.9
96,365 - -1.8
96,385 + -1.8
96,402 - -1.6
96,545 - -1.8
96,548 + -3.0
96,870 - -0.9
97,029 + 10111 mRNA_1743 0.10 1.2
97,152 - 10111 mRNA_1743 0.13 1.4
97,896 - 10111 mRNA_1743 0.32 0.5
97,953 - 10111 mRNA_1743 0.33 -1.2
98,050 - 10111 mRNA_1743 0.36 -2.6
98,586 + 10111 mRNA_1743 0.49 -2.4
98,616 - 10111 mRNA_1743 0.50 -3.9
98,640 + 10111 mRNA_1743 0.50 -1.9
99,211 + 10111 mRNA_1743 0.64 -0.8
99,219 - 10111 mRNA_1743 0.65 0.6
99,658 - 10111 mRNA_1743 0.76 -2.0
99,713 + 10111 mRNA_1743 0.77 -1.4
99,937 - 10111 mRNA_1743 0.83 -0.8
100,106 + 10111 mRNA_1743 0.87 -0.1
100,213 + 10111 mRNA_1743 0.89 -3.2
100,373 - -0.8
100,381 - -1.7
100,519 - -1.3
100,630 - -1.8
100,656 + -0.8
100,668 + -3.0
100,696 + -0.7
100,748 + -2.1
100,819 - -2.7
101,177 - 10112 mRNA_1744 0.22 -1.4
101,182 + 10112 mRNA_1744 0.22 0.3