Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1725

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1725: 10093 - KOG2343 Glucose-repressible protein and related proteins, at 46697 to 49542 10093 mRNA_1726: 10094 - BLAST Protein priA [Grifola frondosa], at 50052 to 51969 10094

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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46,215 - -2.5
46,337 - 0.7
46,352 + -1.2
46,483 + -2.5
46,494 + -1.4
46,496 - -0.7
46,503 + 0.3
46,568 + -2.5
46,657 - 0.9
46,783 + -2.1
46,789 + -0.2
46,803 + -1.4
46,812 - -1.1
46,813 + -1.7
46,833 - -2.7
46,874 - -2.5
46,888 - -2.3
46,895 + -2.7
46,898 - -0.1
46,925 - -1.5
46,939 - -2.4
47,113 + 10093 mRNA_1725 0.15 -0.0
47,200 - 10093 mRNA_1725 0.18 -2.3
47,412 + 10093 mRNA_1725 0.25 -0.6
47,548 + 10093 mRNA_1725 0.30 -0.7
47,682 + 10093 mRNA_1725 0.35 -0.6
47,695 - 10093 mRNA_1725 0.35 -2.5
47,703 - 10093 mRNA_1725 0.35 0.3
47,731 + 10093 mRNA_1725 0.36 -2.7
47,832 + 10093 mRNA_1725 0.40 -3.0
48,061 - 10093 mRNA_1725 0.48 -2.3
48,202 - 10093 mRNA_1725 0.53 -1.8
48,204 - 10093 mRNA_1725 0.53 -0.4
48,225 + 10093 mRNA_1725 0.54 -0.3
48,367 + 10093 mRNA_1725 0.59 -3.7
48,389 - 10093 mRNA_1725 0.59 -0.5
48,430 + 10093 mRNA_1725 0.61 -0.5
48,440 - 10093 mRNA_1725 0.61 -0.9
48,446 + 10093 mRNA_1725 0.61 -2.0
48,446 + 10093 mRNA_1725 0.61 -3.1
48,532 - 10093 mRNA_1725 0.64 -0.7
48,535 + 10093 mRNA_1725 0.65 -2.6
48,562 - 10093 mRNA_1725 0.66 -1.4
48,573 + 10093 mRNA_1725 0.66 -3.5
48,808 - 10093 mRNA_1725 0.74 -1.4
48,878 - 10093 mRNA_1725 0.77 -4.5
48,944 - 10093 mRNA_1725 0.79 -0.8
49,016 + 10093 mRNA_1725 0.81 -1.6
49,111 + 10093 mRNA_1725 0.85 -3.6
49,429 + -2.9
49,516 - -1.1
49,581 + -0.7
49,653 + -2.5
49,738 - -1.5
49,995 + -1.7
49,999 - -0.3
50,094 + -3.6
50,176 + -0.6
50,523 - 10094 mRNA_1726 0.25 -0.5