Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1701

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1700: 10068 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 927160 to 928283 10068 mRNA_1701: 10069 - K03522 fixB, etfA electron transfer flavoprotein alpha subunit, at 928577 to 930398 10069 mRNA_1702: 10070 - Hypothetical Protein, at 930827 to 931156 10070

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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927,678 + 10068 mRNA_1700 0.46 0.7
927,824 + 10068 mRNA_1700 0.59 0.0
927,840 + 10068 mRNA_1700 0.60 -1.7
927,872 + 10068 mRNA_1700 0.63 -0.0
927,928 + 10068 mRNA_1700 0.68 -0.9
928,148 + 10068 mRNA_1700 0.88 0.4
928,412 + -2.1
928,415 - -0.1
928,420 + 0.9
928,562 + -1.0
928,563 + 0.6
928,821 - 10069 mRNA_1701 0.13 -3.5
928,875 + 10069 mRNA_1701 0.16 -2.6
929,516 - 10069 mRNA_1701 0.52 -2.4
929,582 + 10069 mRNA_1701 0.55 -0.9
929,729 + 10069 mRNA_1701 0.63 -1.3
930,270 + -1.3
930,285 - -1.7
930,422 + -4.9
930,424 - 0.5
930,429 + 0.2
930,452 + -3.7
930,453 + -0.6
930,454 - -1.6
930,558 + -2.3
930,578 + 0.5
930,582 - -1.1
930,587 + -0.2
930,890 - 10070 mRNA_1702 0.19 -2.2
931,021 + 10070 mRNA_1702 0.59 2.7
931,167 + -0.3
931,192 + -3.2
931,330 + -1.8