Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1700

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1699: 10067 - K10751 CHAF1B chromatin assembly factor 1 subunit B, at 923686 to 926901 10067 mRNA_1700: 10068 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 927160 to 928283 10068 mRNA_1701: 10069 - K03522 fixB, etfA electron transfer flavoprotein alpha subunit, at 928577 to 930398 10069

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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926,791 - -0.3
926,808 + -0.6
927,066 - -0.5
927,098 - -1.8
927,217 + -2.4
927,342 - 10068 mRNA_1700 0.16 -2.0
927,398 + 10068 mRNA_1700 0.21 -1.5
927,424 - 10068 mRNA_1700 0.23 -0.7
927,551 + 10068 mRNA_1700 0.35 0.1
927,678 + 10068 mRNA_1700 0.46 0.7
927,824 + 10068 mRNA_1700 0.59 0.0
927,840 + 10068 mRNA_1700 0.60 -1.7
927,872 + 10068 mRNA_1700 0.63 -0.0
927,928 + 10068 mRNA_1700 0.68 -0.9
928,148 + 10068 mRNA_1700 0.88 0.4
928,412 + -2.1
928,415 - -0.1
928,420 + 0.9
928,562 + -1.0
928,563 + 0.6
928,821 - 10069 mRNA_1701 0.13 -3.5
928,875 + 10069 mRNA_1701 0.16 -2.6