Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1699

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1698: 10066 - K11493 RCC1 regulator of chromosome condensation, at 920689 to 923433 10066 mRNA_1699: 10067 - K10751 CHAF1B chromatin assembly factor 1 subunit B, at 923686 to 926901 10067 mRNA_1700: 10068 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 927160 to 928283 10068

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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923,463 - 1.0
923,464 + -2.5
923,632 - -2.2
923,635 - 0.6
923,639 + -1.5
923,648 + -1.5
923,658 + -1.8
924,195 + 10067 mRNA_1699 0.16 -1.3
924,935 - 10067 mRNA_1699 0.39 -0.3
925,233 - 10067 mRNA_1699 0.48 -3.4
925,680 + 10067 mRNA_1699 0.62 -3.4
925,760 - 10067 mRNA_1699 0.64 -1.2
926,791 - -0.3
926,808 + -0.6
927,066 - -0.5
927,098 - -1.8
927,217 + -2.4
927,342 - 10068 mRNA_1700 0.16 -2.0
927,398 + 10068 mRNA_1700 0.21 -1.5
927,424 - 10068 mRNA_1700 0.23 -0.7
927,551 + 10068 mRNA_1700 0.35 0.1
927,678 + 10068 mRNA_1700 0.46 0.7
927,824 + 10068 mRNA_1700 0.59 0.0
927,840 + 10068 mRNA_1700 0.60 -1.7
927,872 + 10068 mRNA_1700 0.63 -0.0