Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1695

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1694: 10062 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 914848 to 915614 10062 mRNA_1695: 10063 - BLAST cyclin-like F-box domain containing protein [Rhod..., at 916247 to 917394 10063 mRNA_1696: 10064 - BLAST membrane-associating domain protein [Rhizoctonia sola..., at 917668 to 919209 10064

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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915,260 - 10062 mRNA_1694 0.54 -2.9
915,435 - 10062 mRNA_1694 0.77 -0.4
915,436 + 10062 mRNA_1694 0.77 2.5
915,436 - 10062 mRNA_1694 0.77 -3.1
915,562 + -3.8
915,842 - -2.2
915,889 - -2.3
916,132 + -1.5
916,152 + -3.0
916,311 + -0.8
916,408 - 10063 mRNA_1695 0.14 -3.6
916,438 - 10063 mRNA_1695 0.17 -2.0
916,579 + 10063 mRNA_1695 0.29 0.4
916,579 + 10063 mRNA_1695 0.29 0.3
916,588 - 10063 mRNA_1695 0.30 -0.6
916,691 - 10063 mRNA_1695 0.39 0.8
916,692 + 10063 mRNA_1695 0.39 -1.3
916,901 + 10063 mRNA_1695 0.57 -0.6
916,979 + 10063 mRNA_1695 0.64 -1.1
917,309 - 0.6
917,316 + -1.4
917,592 - -3.2
917,682 - -1.8
917,725 - -0.4
918,024 + 10064 mRNA_1696 0.23 -1.1
918,129 + 10064 mRNA_1696 0.30 -4.1
918,218 - 10064 mRNA_1696 0.36 -0.2
918,324 - 10064 mRNA_1696 0.43 0.8