Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1568

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1567: 9935 - KOG4129 Exopolyphosphatases and related proteins, at 612854 to 615039 9935 mRNA_1568: 9936 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 615434 to 616155 9936 mRNA_1569: 9937 - KOG3114 Uncharacterized conserved protein, at 616331 to 617555 9937

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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614,452 - 9935 mRNA_1567 0.73 -0.4
614,477 - 9935 mRNA_1567 0.74 -0.2
614,518 - 9935 mRNA_1567 0.76 0.5
614,619 - 9935 mRNA_1567 0.81 -0.2
614,756 + 9935 mRNA_1567 0.87 1.1
614,757 - 9935 mRNA_1567 0.87 -1.6
615,048 - -0.8
615,068 + -0.5
615,071 - -0.8
615,093 - -0.4
615,355 - 0.7
615,387 - -0.3
615,390 + -0.3
615,932 - 9936 mRNA_1568 0.69 -2.7
616,100 + -0.2
616,231 + 1.4
616,244 + -0.5
616,249 + -1.3
616,251 + 2.5
616,950 - 9937 mRNA_1569 0.51 1.5