Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1544

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1544: 9912 - K08745 SLC27A1_4, FATP1, FATP4 solute carrier family 27 (fatty acid transporter), member 1/4, at 555337 to 558196 9912 mRNA_1545: 9913 - Hypothetical Protein, at 558416 to 558832 9913

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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554,625 - -0.4
554,631 + -0.8
554,648 + -0.8
554,774 - 0.6
554,912 - -0.8
554,937 - 1.2
554,942 - -0.9
555,088 - -0.7
555,166 - -0.2
555,230 + 1.1
555,231 + 0.0
555,231 + -0.9
555,236 + -1.5
555,237 + 1.0
555,247 - -0.1
555,249 - -0.5
555,401 - -1.0
555,412 + -0.7
555,419 - -0.5
555,433 - 0.1
555,434 + 0.2
555,564 + -0.7
555,564 - -0.1
555,710 - 9912 mRNA_1544 0.13 -0.8
555,724 - 9912 mRNA_1544 0.14 -0.0
555,732 + 9912 mRNA_1544 0.14 1.0
555,851 + 9912 mRNA_1544 0.18 0.1
555,982 - 9912 mRNA_1544 0.23 0.4
556,138 - 9912 mRNA_1544 0.28 -0.3
556,575 - 9912 mRNA_1544 0.43 -0.5
556,589 - 9912 mRNA_1544 0.44 -1.8
556,731 + 9912 mRNA_1544 0.49 -1.0
556,745 - 9912 mRNA_1544 0.49 -0.2
557,164 - 9912 mRNA_1544 0.64 -0.4
557,315 - 9912 mRNA_1544 0.69 0.4
557,460 - 9912 mRNA_1544 0.74 0.8
557,461 + 9912 mRNA_1544 0.74 0.4
557,681 - 9912 mRNA_1544 0.82 2.8
558,268 + -0.1
558,332 - -1.2
558,349 + 0.7
558,350 - 1.4
558,483 + 9913 mRNA_1545 0.16 -2.1
558,509 - 9913 mRNA_1545 0.22 0.5
558,648 + 9913 mRNA_1545 0.56 0.7
558,781 + 9913 mRNA_1545 0.88 0.1
558,928 + 0.3
559,080 + -0.7
559,088 + -0.0
559,144 - -0.8