Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1478

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1477: 9845 - Hypothetical Protein, at 397872 to 399169 9845 mRNA_1478: 9846 - Hypothetical Protein, at 399796 to 400850 9846 mRNA_1479: 9847 - ProSiteProfiles-RNase H domain profile.-PS50879,SUPERFAMILY--SSF53098, at 401327 to 402379 9847

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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398,841 + 9845 mRNA_1477 0.75 0.5
398,842 - 9845 mRNA_1477 0.75 0.6
398,870 + 9845 mRNA_1477 0.77 -0.9
398,888 + 9845 mRNA_1477 0.78 -2.1
398,962 + 9845 mRNA_1477 0.84 -0.4
398,989 + 9845 mRNA_1477 0.86 -0.1
399,033 - 9845 mRNA_1477 0.89 1.0
399,033 + 9845 mRNA_1477 0.89 0.6
399,035 + 9845 mRNA_1477 0.90 1.6
399,166 + 2.5
399,171 + -2.5
399,178 - -0.7
399,179 - -0.1
399,186 - -1.3
399,195 + -0.8
399,200 - -0.4
399,201 + 2.1
399,207 + -2.0
399,217 + -0.3
399,221 + -0.0
399,247 + 0.3
399,269 - 0.4
399,388 - 0.2
399,415 - 0.2
399,495 - -2.2
399,518 - 0.1
399,548 - 1.8
399,629 - -0.7
399,654 - -0.4
399,704 - -1.0
399,740 - 0.1
399,750 + -1.2
400,188 + 9846 mRNA_1478 0.37 -1.5
400,225 - 9846 mRNA_1478 0.41 -1.5
400,237 - 9846 mRNA_1478 0.42 0.4
400,240 + 9846 mRNA_1478 0.42 0.6
400,271 + 9846 mRNA_1478 0.45 0.2
401,066 - 1.6
401,075 + 0.2
401,213 - -1.4
401,220 + -0.3
401,474 - 9847 mRNA_1479 0.14 -0.8
401,597 + 9847 mRNA_1479 0.26 -2.3