Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1402

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1401: 9769 - Hypothetical Protein, at 184306 to 185166 9769 mRNA_1402: 9770 - K06654 PHO80 phosphate system cyclin PHO80, at 185630 to 187322 9770 mRNA_1403: 9771 - K08190 SLC16A14 MFS transporter, MCP family, solute carrier family 16 (monocarboxylic acid transporters), member 14, at 187710 to 190029 9771

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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185,488 + -0.6
185,591 - 2.1
185,900 + 9770 mRNA_1402 0.16 -0.1
185,935 - 9770 mRNA_1402 0.18 0.9
187,331 - -0.5
187,353 + -1.6
187,503 - -3.3
187,509 + 0.3
187,643 - -0.4
187,645 - 1.7
187,653 + -1.0
187,797 - 1.5
187,943 + 9771 mRNA_1403 0.10 -0.1
187,979 - 9771 mRNA_1403 0.12 1.1
188,086 + 9771 mRNA_1403 0.16 -1.5
188,217 + 9771 mRNA_1403 0.22 0.1
188,239 + 9771 mRNA_1403 0.23 0.8